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I've written a proxy script that augments the main front controller and allows Elefant to work in subfolder installations. The code is very short (currently only 48 lines of actual code) and is available here:
Note: If you run into trouble or bugs, please post them below or in the comments at the above link.
The installation steps are as follows:
1. Unpack the Elefant CMS into your desired subfolder.
2. Replace the
.htaccess file with the one included at the link above.
3. Drop the
subfolder.php file into your subfolder beside your
4. Instead of using the web installer, you will need to use the command line install steps found at the bottom of the install page.
You should now be able to run Elefant inside of any subfolder of your choice.